MBody_individualID_project/model/map_classol.h

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/*--------------------------------------------------------------------------
   Author: Thomas Nowotny
  
   Institute: Institute for Nonlinear Dynamics
              University of California San Diego
              La Jolla, CA 92093-0402
  
   email to:  tnowotny@ucsd.edu
  
   initial version: 2002-09-26
  
--------------------------------------------------------------------------*/


#ifndef CLASSOL_H
#define CLASSOL_H

#include <stdint.h>

//--------------------------------------------------------------------------
//--------------------------------------------------------------------------


//--------------------------------------------------------------------------
//--------------------------------------------------------------------------

class classol
{
private:
    void importArray(scalar *, double *, int);
    void exportArray(double *, scalar *, int);
 public:
  NNmodel model;
  scalar *p_pattern;  
  uint64_t *pattern;
  uint64_t *baserates;
  //------------------------------------------------------------------------
  // on the device:
  uint64_t *d_pattern;
  uint64_t *d_baserates;
  //------------------------------------------------------------------------
  unsigned int sumPN, sumKC, sumLHI, sumDN;
  unsigned int size_g; //number of connections
  // end of data fields 

  classol();
  ~classol();
  void init(unsigned int);
#ifndef CPU_ONLY 
  void allocate_device_mem_patterns(); 
  void free_device_mem(); 
#endif
  void read_pnkcsyns(FILE *);
  void read_sparsesyns_par(int, struct SparseProjection, scalar *, FILE *,FILE *,FILE *); 
  void write_pnkcsyns(FILE *); 
  void read_pnlhisyns(FILE *); 
  void write_pnlhisyns(FILE *); 
  void read_kcdnsyns(FILE *); 
  void write_kcdnsyns(FILE *); 
  void read_input_patterns(FILE *); 
  void generate_baserates(); 
  void runGPU(scalar); 
  void runCPU(scalar); 
  void output_state(FILE *, unsigned int); 
#ifndef CPU_ONLY
  void getSpikesFromGPU(); 
  void getSpikeNumbersFromGPU(); 
#endif
  void output_spikes(FILE *, unsigned int); 
  void sum_spikes(); 
  void get_kcdnsyns(); 
};

#endif